Package: AntibodyTiters 0.1.24
AntibodyTiters: Antibody Titer Analysis of Vaccinated Patients
Visualization of antibody titer scores is valuable for examination of vaccination effects. 'AntibodyTiters' visualizes antibody titers of all or selected patients. This package also produces empty excel files in a specified format, in which users can fill in experimental data for visualization. Excel files with toy data can also be produced, so that users can see how it is visualized before obtaining real data. The data should contain titer scores at pre-vaccination, after-1st shot, after-2nd shot, and at least one additional sampling points. Patients with missing values can be included. The first two sampling points (pre-vaccination and after-1st shot) will be plotted discretely, whereas those following will be plotted on a continuous time scale that starts from the day of second shot. Half-life of titer can also be calculated for each pair of sampling points.
Authors:
AntibodyTiters_0.1.24.tar.gz
AntibodyTiters_0.1.24.zip(r-4.5)AntibodyTiters_0.1.24.zip(r-4.4)AntibodyTiters_0.1.24.zip(r-4.3)
AntibodyTiters_0.1.24.tgz(r-4.4-any)AntibodyTiters_0.1.24.tgz(r-4.3-any)
AntibodyTiters_0.1.24.tar.gz(r-4.5-noble)AntibodyTiters_0.1.24.tar.gz(r-4.4-noble)
AntibodyTiters_0.1.24.tgz(r-4.4-emscripten)AntibodyTiters_0.1.24.tgz(r-4.3-emscripten)
AntibodyTiters.pdf |AntibodyTiters.html✨
AntibodyTiters/json (API)
NEWS
| # Install 'AntibodyTiters' in R: |
| install.packages('AntibodyTiters', repos = c('https://hkatomed.r-universe.dev', 'https://cloud.r-project.org')) |
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated 2 years agofrom:c180717f9d. Checks:OK: 7. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Sep 22 2024 |
| R-4.5-win | OK | Sep 22 2024 |
| R-4.5-linux | OK | Sep 22 2024 |
| R-4.4-win | OK | Sep 22 2024 |
| R-4.4-mac | OK | Sep 22 2024 |
| R-4.3-win | OK | Sep 22 2024 |
| R-4.3-mac | OK | Sep 22 2024 |
Exports:emptyABTgroupAttribABThalfLifeABTidABTplotAllABTplotEachABTreadABTtoyABT
Dependencies:askpassbootcellrangerclassclicpp11crayoncurldata.tableDescToolse1071ExactexpmfansigldgluehmshttrjsonlitelatticelifecyclelmommagrittrMASSMatrixmimemvtnormopensslopenxlsxpillarpkgconfigprettyunitsprogressproxyR6RcppreadxlrematchrlangrootSolverstudioapistringisystibbleutf8vctrswithrzip
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Antibody Titer Analysis of Vaccinated Patients. | AntibodyTiters-package AntibodyTiters |
| Production of an empty xlsx file in which experimental results should be recorded. | emptyABT |
| Grouping of patients by scores. | groupAttribABT |
| Calculating half-life from an ABT class object. | halfLifeABT |
| Extracting patient IDs from an ABT class object. | idABT |
| Plotting antibody titers of All patients. | plotAllABT |
| Plotting antibody titers of each patient. | plotEachABT |
| Reading an xlsx file and examining the validity of the dataset. | readABT |
| Production of an xlsx file with toy data. | toyABT |
