{ "_id": "6a102102acfb0bcc41c8bdff", "Package": "AntibodyTiters", "Version": "0.1.24", "Date": "2022-05-24", "Title": "Antibody Titer Analysis of Vaccinated Patients", "Authors@R": "c(person(\"Yuuki\", \"Mizumoto\", role=c(\"aut\")), \nperson(\"Hiroaki\", \"Kato\", role=c(\"aut\", \"cre\"),\nemail=\"hkato@med.shimane-u.ac.jp\", comment=c(ORCID=\"0000-0001-9591-1875\")),\nperson(\"Takeshi\", \"Urano\", role=c(\"ctb\")))", "Author": "Yuuki Mizumoto [aut], Hiroaki Kato [aut, cre]\n(), Takeshi Urano [ctb]", "Maintainer": "Hiroaki Kato ", "Description": "Visualization of antibody titer scores is valuable for\nexamination of vaccination effects. 'AntibodyTiters' visualizes\nantibody titers of all or selected patients. This package also\nproduces empty excel files in a specified format, in which\nusers can fill in experimental data for visualization. Excel\nfiles with toy data can also be produced, so that users can see\nhow it is visualized before obtaining real data. The data\nshould contain titer scores at pre-vaccination, after-1st shot,\nafter-2nd shot, and at least one additional sampling points.\nPatients with missing values can be included. The first two\nsampling points (pre-vaccination and after-1st shot) will be\nplotted discretely, whereas those following will be plotted on\na continuous time scale that starts from the day of second\nshot. Half-life of titer can also be calculated for each pair\nof sampling points.", "License": "GPL-3", "NeedsCompilation": "no", "Type": "Package", "Packaged": { "Date": "2026-05-14 05:56:01 UTC", "User": "root" }, "Config/pak/sysreqs": "cmake make libicu-dev libuv1-dev libssl-dev\nlibx11-dev zlib1g-dev", "Repository": "https://hkatomed.r-universe.dev", "Date/Publication": "2022-05-24 03:10:02 UTC", "RemoteUrl": "https://github.com/cran/AntibodyTiters", "RemoteRef": "HEAD", "RemoteSha": "c180717f9d78e1cf5b5332ba0c11abd69c47d3ba", "MD5sum": "38f1b4a6f6fe40bb3e980de558470d7c", "_user": "hkatomed", "_type": "src", "_file": "AntibodyTiters_0.1.24.tar.gz", "_fileid": "d7e21f929a05646ce4fc1cc5059e285991130d816adef96af79ad1c06a5a1b74", "_filesize": 220479, "_sha256": "d7e21f929a05646ce4fc1cc5059e285991130d816adef96af79ad1c06a5a1b74", "_created": "2026-05-14T05:56:01.000Z", "_published": "2026-05-22T09:25:22.082Z", "_distro": "noble", "_jobs": [ { "job": 77352213038, "time": 155, "config": 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"check": "OK", "artifact": "6988159021" } ], "_buildurl": "https://github.com/r-universe/hkatomed/actions/runs/25844351693", "_status": "success", "_host": "GitHub-Actions", "_upstream": "https://github.com/cran/AntibodyTiters", "_commit": { "id": "c180717f9d78e1cf5b5332ba0c11abd69c47d3ba", "author": "Hiroaki Kato ", "committer": "cran-robot ", "message": "version 0.1.24\n", "time": 1653361802 }, "_maintainer": { "name": "Hiroaki Kato", "email": "hkato@med.shimane-u.ac.jp", "login": "hkatomed", "uuid": 29747829, "orcid": "0000-0001-9591-1875" }, "_registered": true, "_dependencies": [ { "package": "openxlsx", "version": ">= 4.2.4", "role": "Depends" }, { "package": "R", "version": ">= 3.3.0", "role": "Depends" }, { "package": "DescTools", "version": ">= 0.99.43", "role": "Depends" } ], "_owner": "cran", "_selfowned": true, "_usedby": 0, "_updates": [], "_tags": [], "_stars": 0, "_contributors": [ { "user": "hkatomed", "count": 3, "uuid": 29747829 } ], "_userbio": { "uuid": 29747829, "type": "user", "name": "Hiroaki Kato" }, "_downloads": { "count": 292, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/AntibodyTiters" }, "_searchresults": 0, "_rbuild": "4.6.0", "_assets": [ "extra/AntibodyTiters.html", "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/NEWS.html", "extra/NEWS.txt", "manual.pdf" ], "_realowner": "hkatomed", "_cranurl": false, "_releases": [ { "version": "0.1.4", "date": "2021-09-30" }, { "version": "0.1.18", "date": "2021-10-28" }, { "version": "0.1.24", "date": "2022-05-24" } ], "_exports": [ "emptyABT", "groupAttribABT", "halfLifeABT", "idABT", "plotAllABT", "plotEachABT", "readABT", "toyABT" ], "_help": [ { "page": "AntibodyTiters-package", "title": "Antibody Titer Analysis of Vaccinated Patients.", "topics": [ "AntibodyTiters-package", "AntibodyTiters" ] }, { "page": "emptyABT", "title": "Production of an empty xlsx file in which experimental results should be recorded.", "topics": [ "emptyABT" ] }, { "page": "groupAttribABT", "title": "Grouping of patients by scores.", "topics": [ "groupAttribABT" ] }, { "page": "halfLifeABT", "title": "Calculating half-life from an ABT class object.", "topics": [ "halfLifeABT" ] }, { "page": "idABT", "title": "Extracting patient IDs from an ABT class object.", "topics": [ "idABT" ] }, { "page": "plotAllABT", "title": "Plotting antibody titers of All patients.", "topics": [ "plotAllABT" ] }, { "page": "plotEachABT", "title": "Plotting antibody titers of each patient.", "topics": [ "plotEachABT" ] }, { "page": "readABT", "title": "Reading an xlsx file and examining the validity of the dataset.", "topics": [ "readABT" ] }, { "page": "toyABT", "title": "Production of an xlsx file with toy data.", "topics": [ "toyABT" ] } ], "_rundeps": [ "askpass", "bit", "bit64", "boot", "cellranger", "class", "cli", "clipr", "cpp11", "crayon", "curl", "data.table", "DescTools", "e1071", "Exact", "expm", "forcats", "fs", 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